Species Overview¶
This page lists all species analyzed in QualiBact. Click on a species name to view its detailed page. Click the genus name for another page.
Achromobacter¶
Acinetobacter¶
- Acinetobacter baylyi
- Acinetobacter pittii
- Acinetobacter ursingii
- Acinetobacter baumannii
- Acinetobacter johnsonii
- Acinetobacter nosocomialis
Actinobacillus¶
Aerococcus¶
Aeromonas¶
Agrobacterium¶
Aliarcobacter¶
Aliivibrio¶
Alistipes¶
Bacillus¶
- Bacillus licheniformis
- Bacillus subtilis
- Bacillus bombysepticus
- Bacillus cereus
- Bacillus anthracis
- Bacillus paralicheniformis
- Bacillus mobilis
- Bacillus spizizenii
- Bacillus paranthracis
- Bacillus wiedmannii
- Bacillus toyonensis
- Bacillus altitudinis
- Bacillus thuringiensis
- Bacillus velezensis
- Bacillus mycoides
- Bacillus safensis
Bacteroides¶
- Bacteroides xylanisolvens
- Bacteroides cellulosilyticus
- Bacteroides fragilis
- Bacteroides thetaiotaomicron
- Bacteroides uniformis
- Bacteroides stercoris
- Bacteroides ovatus
- Bacteroides caccae
Bartonella¶
Bifidobacterium¶
- Bifidobacterium longum
- Bifidobacterium breve
- Bifidobacterium pseudocatenulatum
- Bifidobacterium dentium
- Bifidobacterium animalis
- Bifidobacterium adolescentis
- Bifidobacterium bifidum
Bordetella¶
Borreliella¶
Brachyspira¶
Bradyrhizobium¶
Brucella¶
Burkholderia¶
- Burkholderia cenocepacia
- Burkholderia gladioli
- Burkholderia orbicola
- Burkholderia dolosa
- Burkholderia ubonensis
- Burkholderia vietnamiensis
- Burkholderia multivorans
- Burkholderia stagnalis
- Burkholderia contaminans
- Burkholderia mallei
- Burkholderia cepacia
Campylobacter¶
- Campylobacter coli
- Campylobacter jejuni
- Campylobacter upsaliensis
- Campylobacter hyointestinalis
- Campylobacter lari
- Campylobacter fetus
Caulobacter¶
Chlamydia¶
Chlamydophila¶
Citrobacter¶
- Citrobacter koseri
- Citrobacter farmeri
- Citrobacter braakii
- Citrobacter portucalensis
- Citrobacter youngae
- Citrobacter rodentium
- Citrobacter freundii
- Citrobacter amalonaticus
- Citrobacter sedlakii
- Citrobacter werkmanii
Clostridium¶
- Clostridium tetani
- Clostridium difficile
- Clostridium botulinum
- Clostridium cagae
- Clostridium beijerinckii
Corynebacterium¶
- Corynebacterium jeikeium
- Corynebacterium striatum
- Corynebacterium glutamicum
- Corynebacterium diphtheriae
- Corynebacterium pseudodiphtheriticum
- Corynebacterium ulcerans
Cronobacter¶
Curtobacterium¶
Cutibacterium¶
Deinococcus¶
Dichelobacter¶
Elizabethkingia¶
Enterobacter¶
- Enterobacter kobei
- Enterobacter asburiae
- Enterobacter hormaechei
- Enterobacter bugandensis
- Enterobacter ludwigii
- Enterobacter roggenkampii
- Enterobacter cloacae
Enterococcus¶
- Enterococcus gallinarum
- Enterococcus hirae
- Enterococcus faecalis
- Enterococcus lactis
- Enterococcus avium
- Enterococcus casseliflavus
- Enterococcus cecorum
- Enterococcus durans
- Enterococcus faecium
Erwinia¶
Erysipelothrix¶
Escherichia¶
- Escherichia ruysiae
- Escherichia marmotae
- Escherichia fergusonii
- Escherichia albertii
- Escherichia coli
Flavobacterium¶
Francisella¶
Fusobacterium¶
Glaesserella¶
Haemophilus¶
Hafnia¶
Helicobacter¶
Hungateiclostridium¶
Janthinobacterium¶
Klebsiella¶
- Klebsiella ornithinolytica
- Klebsiella variicola
- Klebsiella pneumoniae
- Klebsiella quasipneumoniae
- Klebsiella planticola
- Klebsiella michiganensis
- Klebsiella oxytoca
- Klebsiella grimontii
- Klebsiella aerogenes
Lacticaseibacillus¶
Lactiplantibacillus¶
Lactobacillus¶
- Lactobacillus paragasseri
- Lactobacillus johnsonii
- Lactobacillus acidophilus
- Lactobacillus gasseri
- Lactobacillus crispatus
Lactococcus¶
Legionella¶
Leptospira¶
Ligilactobacillus¶
Limosilactobacillus¶
Listeria¶
Mammaliicoccus¶
Mannheimia¶
Mesomycoplasma¶
Micrococcus¶
Moraxella¶
Morganella¶
Mycobacterium¶
- Mycobacterium avium
- Mycobacterium kansasii
- Mycobacterium intracellulare
- Mycobacterium smegmatis
- Mycobacterium tuberculosis
- Mycobacterium marinum
- Mycobacterium abscessus
- Mycobacterium chelonae
Mycoplasmoides¶
Mycoplasmopsis¶
Neisseria¶
- Neisseria polysaccharea
- Neisseria perflava
- Neisseria bergeri
- Neisseria flavescens
- Neisseria meningitidis
- Neisseria lactamica
- Neisseria gonorrhoeae
Oenococcus¶
Orientia¶
Ornithobacterium¶
Paenibacillus¶
Parabacteroides¶
Pasteurella¶
Pectobacterium¶
Pediococcus¶
Phocaeicola¶
Priestia¶
Proteus¶
Providencia¶
Pseudoalteromonas¶
Pseudomonas¶
- Pseudomonas juntendi
- Pseudomonas paracarnis
- Pseudomonas fulva
- Pseudomonas aeruginosa
- Pseudomonas syringae
- Pseudomonas putida
- Pseudomonas glycinae
- Pseudomonas avellanae
- Pseudomonas monteilii
- Pseudomonas fluorescens
- Pseudomonas asiatica
- Pseudomonas marginalis
- Pseudomonas alloputida
- Pseudomonas protegens
Ralstonia¶
Rhizobium¶
Salmonella¶
Serratia¶
- Serratia ureilytica
- Serratia nematodiphila
- Serratia nevei
- Serratia liquefaciens
- Serratia marcescens
- Serratia bockelmannii
Sinorhizobium¶
Staphylococcus¶
- Staphylococcus pseudintermedius
- Staphylococcus lugdunensis
- Staphylococcus coagulans
- Staphylococcus saprophyticus
- Staphylococcus epidermidis
- Staphylococcus chromogenes
- Staphylococcus aureus
- Staphylococcus argenteus
- Staphylococcus simulans
- Staphylococcus haemolyticus
- Staphylococcus warneri
- Staphylococcus xylosus
- Staphylococcus equorum
- Staphylococcus capitis
- Staphylococcus hominis
Stenotrophomonas¶
- Stenotrophomonas sepilia
- Stenotrophomonas pavanii
- Stenotrophomonas geniculata
- Stenotrophomonas maltophilia
Streptococcus¶
- Streptococcus agalactiae
- Streptococcus equi
- Streptococcus suis
- Streptococcus mitis
- Streptococcus pseudopneumoniae
- Streptococcus salivarius
- Streptococcus canis
- Streptococcus pneumoniae
- Streptococcus gordonii
- Streptococcus anginosus
- Streptococcus mutans
- Streptococcus uberis
- Streptococcus oralis
- Streptococcus parasanguinis
- Streptococcus pyogenes
- Streptococcus dysgalactiae
Streptomyces¶
Stutzerimonas¶
Taylorella¶
Treponema¶
Turicibacter¶
Vibrio¶
- Vibrio metschnikovii
- Vibrio alginolyticus
- Vibrio vulnificus
- Vibrio parahaemolyticus
- Vibrio anguillarum
- Vibrio cholerae
- Vibrio diabolicus
- Vibrio mediterranei
- Vibrio fluvialis
Wolbachia¶
Xanthomonas¶
- Xanthomonas euvesicatoria
- Xanthomonas arboricola
- Xanthomonas hortorum
- Xanthomonas cissicola
- Xanthomonas campestris
- Xanthomonas oryzae
Xylella¶
Yersinia¶
For more details on the methods used to derive these metrics, please see the Methods page. For a summary of the metrics and criteria used, please see the Summary page.