Streptomyces Overview¶

This page provides an overview of the genus, including links to species-specific pages and general information.

Genus Species Count Summary¶

Breakdown of genomes filtered and retained by using these metrics:

species	original_count	filtered_out_count	final_count
Streptomyces_albidoflavus	197	17	180
Streptomyces_anthocyanicus	136	13	123

📊 Download species counts table

Genus Summary Metrics¶

This section provides a summary of the metrics for the genus:

species	metric	lower_bounds	upper_bounds
Streptomyces_anthocyanicus	N50	32000	nan
Streptomyces_anthocyanicus	no_of_contigs	nan	570
Streptomyces_anthocyanicus	GC_Content	71	73
Streptomyces_anthocyanicus	Completeness	100	nan
Streptomyces_anthocyanicus	Contamination	nan	1
Streptomyces_anthocyanicus	Total_Coding_Sequences	7300	8400
Streptomyces_anthocyanicus	Genome_Size	8.1e+06	9.1e+06
Streptomyces_albidoflavus	N50	6000	nan
Streptomyces_albidoflavus	no_of_contigs	nan	1550
Streptomyces_albidoflavus	GC_Content	72	74
Streptomyces_albidoflavus	Completeness	95	nan
Streptomyces_albidoflavus	Contamination	nan	2
Streptomyces_albidoflavus	Total_Coding_Sequences	5700	7400
Streptomyces_albidoflavus	Genome_Size	6.3e+06	7.8e+06

📊 Download genus summary metrics table

Genus Visualizations¶

These plots show the main summary visualizations for this genus, including distributions of key genomic metrics such as genome size, GC content, number of contigs, and other relevant statistics. The boxplot for each species is based on the distribution (i.e. median, q1, q3, min and max) of the filtered genomes. The red line is the lower threshold and the blue line is the upper threshold. Use these plots to compare and explore the diversity and characteristics of genomes within this genus: