Orientia Overview¶
This page provides an overview of the genus, including links to species-specific pages and general information.
Genus Species Count Summary¶
Breakdown of genomes filtered and retained by using these metrics:
| species | original_count | filtered_out_count | final_count |
|---|---|---|---|
| Orientia_tsutsugamushi | 131 | 12 | 119 |
📊 Download species counts table
Genus Summary Metrics¶
This section provides a summary of the metrics for the genus:
| species | metric | lower_bounds | upper_bounds |
|---|---|---|---|
| Orientia_tsutsugamushi | N50 | 0 | nan |
| Orientia_tsutsugamushi | no_of_contigs | nan | 3340 |
| Orientia_tsutsugamushi | GC_Content | 29 | 45 |
| Orientia_tsutsugamushi | Completeness | 4 | nan |
| Orientia_tsutsugamushi | Contamination | nan | 9 |
| Orientia_tsutsugamushi | Total_Coding_Sequences | 200 | 4900 |
| Orientia_tsutsugamushi | Genome_Size | 100000 | 2.6e+06 |