Enterobacter Overview¶

This page provides an overview of the genus, including links to species-specific pages and general information.

Genus Species Count Summary¶

Breakdown of genomes filtered and retained by using these metrics:

species	original_count	filtered_out_count	final_count
Enterobacter_hormaechei	8967	299	8668
Enterobacter_cloacae	1287	51	1236
Enterobacter_kobei	1055	42	1013
Enterobacter_roggenkampii	819	23	796
Enterobacter_asburiae	417	18	399
Enterobacter_ludwigii	324	12	312
Enterobacter_bugandensis	310	13	297

📊 Download species counts table

Genus Summary Metrics¶

This section provides a summary of the metrics for the genus:

species	metric	lower_bounds	upper_bounds
Enterobacter_kobei	N50	60000	nan
Enterobacter_kobei	no_of_contigs	nan	330
Enterobacter_kobei	GC_Content	54	56
Enterobacter_kobei	Completeness	94	nan
Enterobacter_kobei	Contamination	nan	3
Enterobacter_kobei	Total_Coding_Sequences	4200	5700
Enterobacter_kobei	Genome_Size	4.6e+06	5.8e+06
Enterobacter_asburiae	N50	29000	nan
Enterobacter_asburiae	no_of_contigs	nan	470
Enterobacter_asburiae	GC_Content	54	57
Enterobacter_asburiae	Completeness	96	nan
Enterobacter_asburiae	Contamination	nan	5
Enterobacter_asburiae	Total_Coding_Sequences	4100	5700
Enterobacter_asburiae	Genome_Size	4.4e+06	5.7e+06
Enterobacter_hormaechei	N50	63000	nan
Enterobacter_hormaechei	no_of_contigs	nan	270
Enterobacter_hormaechei	GC_Content	54	56
Enterobacter_hormaechei	Completeness	97	nan
Enterobacter_hormaechei	Contamination	nan	4
Enterobacter_hormaechei	Total_Coding_Sequences	4100	5700

... and 29 more rows

📊 Download genus summary metrics table

Genus Visualizations¶

These plots show the main summary visualizations for this genus, including distributions of key genomic metrics such as genome size, GC content, number of contigs, and other relevant statistics. The boxplot for each species is based on the distribution (i.e. median, q1, q3, min and max) of the filtered genomes. The red line is the lower threshold and the blue line is the upper threshold. Use these plots to compare and explore the diversity and characteristics of genomes within this genus: