Borreliella Overview¶

This page provides an overview of the genus, including links to species-specific pages and general information.

Genus Species Count Summary¶

Breakdown of genomes filtered and retained by using these metrics:

species	original_count	filtered_out_count	final_count
Borreliella_burgdorferi	636	65	571
Borreliella_garinii	214	13	201
Borreliella_afzelii	152	7	145

📊 Download species counts table

Genus Summary Metrics¶

This section provides a summary of the metrics for the genus:

species	metric	lower_bounds	upper_bounds
Borreliella_garinii	N50	12000	nan
Borreliella_garinii	no_of_contigs	nan	450
Borreliella_garinii	GC_Content	27	29
Borreliella_garinii	Completeness	78	nan
Borreliella_garinii	Contamination	nan	3
Borreliella_garinii	Total_Coding_Sequences	800	1800
Borreliella_garinii	Genome_Size	800000	1.5e+06
Borreliella_burgdorferi	N50	2000	nan
Borreliella_burgdorferi	no_of_contigs	nan	1030
Borreliella_burgdorferi	GC_Content	27	33
Borreliella_burgdorferi	Completeness	84	nan
Borreliella_burgdorferi	Contamination	nan	9
Borreliella_burgdorferi	Total_Coding_Sequences	800	2000
Borreliella_burgdorferi	Genome_Size	900000	1.7e+06
Borreliella_afzelii	N50	12000	nan
Borreliella_afzelii	no_of_contigs	nan	430
Borreliella_afzelii	GC_Content	27	29
Borreliella_afzelii	Completeness	95	nan
Borreliella_afzelii	Contamination	nan	2
Borreliella_afzelii	Total_Coding_Sequences	800	1700

... and 1 more rows

📊 Download genus summary metrics table

Genus Visualizations¶

These plots show the main summary visualizations for this genus, including distributions of key genomic metrics such as genome size, GC content, number of contigs, and other relevant statistics. The boxplot for each species is based on the distribution (i.e. median, q1, q3, min and max) of the filtered genomes. The red line is the lower threshold and the blue line is the upper threshold. Use these plots to compare and explore the diversity and characteristics of genomes within this genus: