Bacillus Overview¶

This page provides an overview of the genus, including links to species-specific pages and general information.

Genus Species Count Summary¶

Breakdown of genomes filtered and retained by using these metrics:

species	original_count	filtered_out_count	final_count
Bacillus_subtilis	2197	143	2054
Bacillus_anthracis	1648	97	1551
Bacillus_paranthracis	797	44	753
Bacillus_bombysepticus	615	58	557
Bacillus_thuringiensis	516	36	480
Bacillus_cereus	465	20	445
Bacillus_velezensis	292	19	273
Bacillus_wiedmannii	186	10	176
Bacillus_licheniformis	167	8	159
Bacillus_mycoides	153	8	145
Bacillus_mobilis	148	7	141
Bacillus_spizizenii	140	7	133
Bacillus_toyonensis	139	11	128
Bacillus_safensis	120	12	108
Bacillus_paralicheniformis	110	4	106
Bacillus_altitudinis	101	7	94

📊 Download species counts table

Genus Summary Metrics¶

This section provides a summary of the metrics for the genus:

species	metric	lower_bounds	upper_bounds
Bacillus_licheniformis	N50	84000	nan
Bacillus_licheniformis	no_of_contigs	nan	170
Bacillus_licheniformis	GC_Content	45	47
Bacillus_licheniformis	Completeness	92	nan
Bacillus_licheniformis	Contamination	nan	6
Bacillus_licheniformis	Total_Coding_Sequences	4100	5100
Bacillus_licheniformis	Genome_Size	4e+06	4.9e+06
Bacillus_subtilis	N50	23000	nan
Bacillus_subtilis	no_of_contigs	nan	470
Bacillus_subtilis	GC_Content	42	45
Bacillus_subtilis	Completeness	92	nan
Bacillus_subtilis	Contamination	nan	12
Bacillus_subtilis	Total_Coding_Sequences	3800	5000
Bacillus_subtilis	Genome_Size	3.6e+06	4.6e+06
Bacillus_bombysepticus	N50	16000	nan
Bacillus_bombysepticus	no_of_contigs	nan	2350
Bacillus_bombysepticus	GC_Content	34	36
Bacillus_bombysepticus	Completeness	99	nan
Bacillus_bombysepticus	Contamination	nan	1
Bacillus_bombysepticus	Total_Coding_Sequences	5200	7700

... and 92 more rows

📊 Download genus summary metrics table

Genus Visualizations¶

These plots show the main summary visualizations for this genus, including distributions of key genomic metrics such as genome size, GC content, number of contigs, and other relevant statistics. The boxplot for each species is based on the distribution (i.e. median, q1, q3, min and max) of the filtered genomes. The red line is the lower threshold and the blue line is the upper threshold. Use these plots to compare and explore the diversity and characteristics of genomes within this genus: