Acinetobacter Overview¶

This page provides an overview of the genus, including links to species-specific pages and general information.

Genus Species Count Summary¶

Breakdown of genomes filtered and retained by using these metrics:

species	original_count	filtered_out_count	final_count
Acinetobacter_baumannii	28284	918	27366
Acinetobacter_pittii	642	21	621
Acinetobacter_nosocomialis	345	19	326
Acinetobacter_baylyi	258	19	239
Acinetobacter_ursingii	119	7	112
Acinetobacter_johnsonii	101	6	95

📊 Download species counts table

Genus Summary Metrics¶

This section provides a summary of the metrics for the genus:

species	metric	lower_bounds	upper_bounds
Acinetobacter_baylyi	N50	28000	nan
Acinetobacter_baylyi	no_of_contigs	nan	280
Acinetobacter_baylyi	GC_Content	40	41
Acinetobacter_baylyi	Completeness	98	nan
Acinetobacter_baylyi	Contamination	nan	1
Acinetobacter_baylyi	Total_Coding_Sequences	3000	3700
Acinetobacter_baylyi	Genome_Size	3.2e+06	3.9e+06
Acinetobacter_pittii	N50	26000	nan
Acinetobacter_pittii	no_of_contigs	nan	360
Acinetobacter_pittii	GC_Content	38	40
Acinetobacter_pittii	Completeness	97	nan
Acinetobacter_pittii	Contamination	nan	2
Acinetobacter_pittii	Total_Coding_Sequences	3400	4400
Acinetobacter_pittii	Genome_Size	3.6e+06	4.5e+06
Acinetobacter_ursingii	N50	33000	nan
Acinetobacter_ursingii	no_of_contigs	nan	260
Acinetobacter_ursingii	GC_Content	39	41
Acinetobacter_ursingii	Completeness	99	nan
Acinetobacter_ursingii	Contamination	nan	2
Acinetobacter_ursingii	Total_Coding_Sequences	3000	4000

... and 22 more rows

📊 Download genus summary metrics table

Genus Visualizations¶

These plots show the main summary visualizations for this genus, including distributions of key genomic metrics such as genome size, GC content, number of contigs, and other relevant statistics. The boxplot for each species is based on the distribution (i.e. median, q1, q3, min and max) of the filtered genomes. The red line is the lower threshold and the blue line is the upper threshold. Use these plots to compare and explore the diversity and characteristics of genomes within this genus: